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Precision oncology through next generation sequencing in hepatocellular carcinoma

Shinde, Sayali, Bigogno, Carola Maria, Simmons, Ana, Kathuria, Nikita, Ghose, Aruni, Apte, Vedika, Lapitan, Patricia, Makker, Shania, Caglayan, Aydin, Boussios, Stergios and others. (2025) Precision oncology through next generation sequencing in hepatocellular carcinoma. Heliyon, 11 (3). Article Number e42054. E-ISSN 2405-8440. (doi:10.1016/j.heliyon.2025.e42054) (KAR id:108860)

Abstract

Hepatocellular carcinoma (HCC) is a primary liver cancer that originates from underlying inflammation, often associated with Hepatitis B virus (HBV) or Hepatitis C virus (HCV) infections. Despite the availability of treatments, there are high rates of tumour relapse due to the development of drug resistance in infected cells. Next-Generation Sequencing (NGS) plays a crucial role in overcoming this issue by sequencing both viral and host genomes to identify mutations and genetic heterogeneity. The knowledge gained from sequencing is then utilised to develop countermeasures against these mutants through different combination therapies. Advances in NGS have led to sequencing with higher accuracy and throughput, thereby enabling personalized and effective treatments. The purpose of this article is to highlight how NGS has contributed to precision medicine in HCC and the possible integration of artificial intelligence (AI) to bolster the advancement.

Item Type: Article
DOI/Identification number: 10.1016/j.heliyon.2025.e42054
Uncontrolled keywords: virus, precision oncology, hepatocellular carcinoma, next generation sequencing, artificial intelligence
Subjects: R Medicine
Divisions: Divisions > Division of Natural Sciences > Kent and Medway Medical School
Funders: Medway NHS Foundation Trust (https://ror.org/01apxt611)
SWORD Depositor: JISC Publications Router
Depositing User: JISC Publications Router
Date Deposited: 20 Mar 2025 14:34 UTC
Last Modified: 21 Mar 2025 09:12 UTC
Resource URI: https://kar.kent.ac.uk/id/eprint/108860 (The current URI for this page, for reference purposes)

University of Kent Author Information

Boussios, Stergios.

Creator's ORCID: https://orcid.org/0000-0002-2512-6131
CReDIT Contributor Roles: Supervision, Writing - review and editing
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