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Competitive Intramolecular Hydrogen Bonding: Offering Molecules a Choice

Sun, Yu, Morton, Evelyn R., Bhabha, Hunaida, Clark, Ewan R., Bučar, Dejan‐Krešimir, Barros‐Metlova, Victoria, Gould, Jamie A., Aliev, Abil E., Haynes, Cally J. E. (2024) Competitive Intramolecular Hydrogen Bonding: Offering Molecules a Choice. ChemPlusChem, 89 (8). Article Number e202400055. E-ISSN 2192-6506. (doi:10.1002/cplu.202400055) (KAR id:106168)

Abstract

The conformational preferences of N‐((6‐methylpyridin‐2‐yl)carbamothioyl)benzamide were studied in solution, the gas phase and the solid state via a combination of NMR, density functional theory (DFT) and single crystal X‐ray techniques. This acyl thiourea derivative can adopt two classes of low energy conformation, each stabilized by a different 6‐membered intramolecular hydrogen bond (IHB) pseudoring. Analysis in different solvents revealed that the conformational preference of this molecule is polarity dependent, with increasingly polar environments yielding a higher proportion of the minor conformer containing an NH⋅⋅⋅N IHB. The calculated barrier to interconversion is consistent with dynamic behaviour at room temperature, despite the propensity of 6‐membered IHB pseudorings to be static. This work demonstrates that introducing competitive IHB pathways can render static IHBs more dynamic and that such systems could have potential as chameleons in drug design.

Item Type: Article
DOI/Identification number: 10.1002/cplu.202400055
Uncontrolled keywords: drug design, NMR, dynamic exchange, intramolecular hydrogen bonding, conformational analysis
Subjects: Q Science
Divisions: Divisions > Division of Natural Sciences > Chemistry and Forensics
Funders: University College London (https://ror.org/02jx3x895)
SWORD Depositor: JISC Publications Router
Depositing User: JISC Publications Router
Date Deposited: 05 Jun 2024 09:08 UTC
Last Modified: 05 Nov 2024 13:11 UTC
Resource URI: https://kar.kent.ac.uk/id/eprint/106168 (The current URI for this page, for reference purposes)

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