Rando, Halie M., Wadlington, William H., Johnson, Jennifer L., Stutchman, Jeremy T., Trut, Lyudmila N., Farré, Marta, Kukekova, Anna V. (2019) The Red Fox Y-Chromosome in Comparative Context. Genes, 10 (6). Article Number 409. ISSN 2073-4425. (doi:10.3390/genes10060409) (KAR id:74226)
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Official URL https://doi.org/10.3390/genes10060409 |
Abstract
While the number of mammalian genome assemblies has proliferated, Y-chromosome
such as its high repeat content, that present challenges to assembly with short-read, next-generation
dog (Canis lupus familiaris), and grey wolf (Canis lupus lupus), providing the opportunity to examine
data-driven approach to identifying Y-chromosome sequence among the scaffolds that comprise the
of cats, dogs, and wolves were identified. Next, analysis of the resequenced genomes of 15 male
copy number variation consistent with the heterogametic chromosome. Analyzing variation across
The gene content of these scaffolds is consistent overall with that of the Y-chromosome in other
has been reported in related species and fewer copies of SRY than in other canids. The assignment of
genome while providing resources for future analyses of canid Y-chromosome evolution.
Item Type: | Article |
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DOI/Identification number: | 10.3390/genes10060409 |
Uncontrolled keywords: | Y-chromosome; carnivore; Vulpes vulpes; sex chromosomes; MSY; Y-chromosome genes; copy-number variation; BCORY2; UBE1Y; next-generation sequencing |
Divisions: | Divisions > Division of Natural Sciences > School of Biosciences |
Depositing User: | Marta Farre Belmonte |
Date Deposited: | 03 Jun 2019 15:40 UTC |
Last Modified: | 21 Sep 2020 14:59 UTC |
Resource URI: | https://kar.kent.ac.uk/id/eprint/74226 (The current URI for this page, for reference purposes) |
Farré, Marta: | ![]() |
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