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Number of items: 28.

Article

Farré, Marta and Kim, Jaebum and Proskuryakova, Anastasia A and Zhang, Yang and Kulemzina, Anastasia I and Li, Qiye and Zhou, Yang and Xiong, Yingqi and Johnson, Jennifer L and Perelman, Polina and Johnson, Warren E and Warren, Wesley C. and Kukekova, Anna V and Zhang, Guojie and O'Brien, Stephen J and Ryder, Oliver A and Graphodatsky, Alexander S and Ma, Jian and Lewin, Harris A and Larkin, Denis M (2019) Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks. Genome Research, . ISSN 1549-5469. (doi:https://doi.org/10.1101/gr.239863.118) (Full text available)
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Ruvinskiy, Daniil and Larkin, Denis M and Farré, Marta (2019) A Near Chromosome Assembly of the Dromedary Camel Genome. Frontiers in genetics, 10 . p. 32. ISSN 1664-8021. (Full text available)
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Farré, Marta and Li, Qiye and Zhou, Yang and Damas, Joana and Chemnick, Leona G and Kim, Jaebum and Ryder, Oliver A and Ma, Jian and Zhang, Guojie and Larkin, Denis M and Lewin, Harris A (2019) A near-chromosome-scale genome assembly of the gemsbok (Oryx gazella): an iconic antelope of the Kalahari desert. GigaScience, 8 (2). giy162. ISSN 2047-217X. (doi:https://doi.org/10.1093/gigascience/giy162) (Full text available)
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O’Connor, Rebecca and Farré, Marta and Joseph, Sunitha and Damas, Joana and Kiazim, Lucas and Jennings, Rebecca and Bennett, Sophie and Slack, Eden A and Allanson, Emily and Larkin, Denis M and Griffin, Darren K. (2018) Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes. Genome Biology, 19 (1). ISSN 1474-760X. (doi:https://doi.org/10.1186/s13059-018-1550-x) (Full text available)
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Damas, Joana and Kim, Jaebum and Farré, Marta and Griffin, Darren K. and Larkin, Denis M. (2018) Reconstruction of avian ancestral karyotypes reveals differences in the evolutionary history of macro- and microchromosomes. Genome Biology, 19 (1). ISSN 1474-760X. (doi:https://doi.org/10.1186/s13059-018-1544-8) (Full text available)
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Griffin, Darren K. and O'Connor, Rebecca and Romanov, Michael N and Damas, J and Farré, Marta and Martell, Henry and Kiazim, Lucas and Jennings, R and Mandawala, A and Joseph, S and Fowler, Katie E and Slack, Eden A and Allanson, Emily and Ferguson-Smith, Malcolm and Barrett, Paul M and Valenzuela, Nicole and Larkin, Denis M (2018) Jurassic spark: Mapping the genomes of birds and other dinosaurs. Comparative Cytogenetics, 12 (3). 322-323, Abstract L13. ISSN 1993-0771. E-ISSN 1993-078X. (doi:https://doi.org/10.3897/CompCytogen.v12i3.27748) (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Rando, Halie and Farré, Marta and Robson, Michael and Won, Naomi and Johnson, Jennifer and Buch, Ronak and Bastounes, Estelle and Xiang, Xueyan and Feng, Shaohong and Liu, Shiping and Xiong, Zijun and Kim, Jaebum and Zhang, Guojie and Trut, Lyudmila and Larkin, Denis and Kukekova, Anna (2018) Construction of Red Fox Chromosomal Fragments from the Short-Read Genome Assembly. Genes, 9 (6). p. 308. ISSN 2073-4425. E-ISSN 2073-4425. (doi:https://doi.org/10.3390/genes9060308) (Full text available)
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O'Connor, Rebecca and Romanov, Michael N and Kiazim, Lucas G and Barrett, Paul M and Farré, Marta and Damas, Joana and Ferguson-Smith, Malcolm A. and Valenzuela, Nicole and Larkin, Denis M and Griffin, Darren K. (2018) Reconstruction of the diapsid ancestral genome permits chromosome evolution tracing in avian and non-avian dinosaurs. Nature Communications, 9 . ISSN 2041-1723. (doi:https://doi.org/10.1038/s41467-018-04267-9) (Full text available)
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Proskuryakova, Anastasia A and Kulemzina, Anastasia I and Perelman, Polina L and Makunin, Alexey I and Larkin, Denis M and Farré, Marta and Kukekova, Anna V and Lynn Johnson, Jennifer and Lemskaya, Natalya A and Beklemisheva, Violetta R and Roelke-Parker, Melody E and Bellizzi, June and Ryder, Oliver A and O'Brien, Stephen J and Graphodatsky, Alexander S (2017) X Chromosome Evolution in Cetartiodactyla. Genes, 8 (9). p. 216. ISSN 2073-4425. (doi:https://doi.org/10.3390/genes8090216) (Full text available)
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Kim, Jaebum and Farré, Marta and Auvil, Loretta and Capitanu, Boris and Larkin, Denis M and Ma, Jian and Lewin, Harris A (2017) Reconstruction and evolutionary history of eutherian chromosomes. Proceedings of the National Academy of Sciences of the United States of America, 114 (27). E5379-E5388. ISSN 1091-6490. (doi:https://doi.org/10.1073/pnas.1702012114) (Full text available)
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Damas, J. and O'Connor, Rebecca and Farré, Marta and Lenis, V.P.E. and Martell, H.J. and Mandawala, A. and Fowler, K. and Joseph, S. and Swain, M.T. and Griffin, Darren K. and Larkin, D.M. (2016) Upgrading short read animal genome assemblies to chromosome level using comparative genomics and a universal probe set. Genome Research, 27 . pp. 875-884. ISSN 1088-9051. (doi:https://doi.org/10.1101/gr.213660.116) (Full text available)
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O'Connor, Rebecca and Romanov, Michael N and Farré, Marta and Larkin, Denis M and Griffin, Darren K. (2016) Gross genome evolution in the Dinosauria. Chromosome Research, 24 (Supp 1). S36-S37, Abstract O19. ISSN 0967-3849. E-ISSN 1573-6849. (doi:https://doi.org/10.1007/s10577-016-9532-x) (Access to this publication is currently restricted. You may be able to access a copy if URLs are provided)
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Farré, Marta and Narayan, Jitendra and Slavov, Gancho T. and Damas, Joana and Auvil, Loretta and Li, Cai and Jarvis, Erich D. and Burt, David W. and Griffin, Darren K. and Larkin, Denis M. (2016) Novel Insights into Chromosome Evolution in Birds, Archosaurs, and Reptiles. Genome Biology and Evolution, 8 (8). pp. 2442-2451. ISSN 1759-6653. (doi:https://doi.org/10.1093/gbe/evw166) (Full text available)
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O'Connor, Rebecca and Damas, J and Farré, Marta and Romanov, Michael N and Martell, Henry and Fonseka, Gothami and Jennings, R and Kiazam, L and Bennett, Sophie and Ward, Jake and Mandawala, A and Joseph, S and Frodsham, Richard and Lawrie, M and Archibald, Alan L. and Walling, Grant A and Fowler, Katie E and Larkin, Denis M and Griffin, Darren K. (2016) Upgrading molecular cytogenetics to study reproduction and reproductive isolation in mammals, birds, and dinosaurs. Cytogenetic and Genome Research, 148 (2–3). 151-152, Abstract VII.13. ISSN 1424-8581. E-ISSN 1424–859X. (Unpublished) (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Schmid, Michael and Smith, Jacqueline and Burt, David W. and Aken, Bronwen L. and Antin, Parker B. and Archibald, Alan L. and Ashwell, Chris and Blackshear, Perry J. and Boschiero, Clarissa and Brown, C. Titus and Burgess, Shane C. and Cheng, Hans H. and Chow, William and Coble, Derrick J. and Cooksey, Amanda and Crooijmans, Richard P.M.A. and Damas, J. and Davis, Richard V.N. and de Koning, Dirk-Jan and Delany, Mary E and Derrien, Thomas and Desta, Takele T. and Dunn, I C and Dunn, Matthew and Ellegren, Hans and Eöry, Lél and Erb, Ionas and Farré, Marta and Fasold, Mario and Fleming, Damarius and Flicek, Paul and Fowler, Katie E and Frésard, Laure and Froman, D. P. and Garceau, Valerie and Gardner, P. P. and Gheyas, Almas A. and Griffin, Darren K. and Groenen, Martien A. M. and Haaf, T. and Hanotte, Olivier and Hart, Alan and Haslerova, Lenka and Hedges, S.B. and Hertel, Jana and Howe, Kerstin and Hubbard, Allen and Hume, David A. and Kaiser, Pete and Kedra, Darek and Kemp, Stephen J. and Klopp, Christophe and Kniel, Kalmia E. and Kuo, Richard and Lagarrigue, Sandrine and Lamont, S J and Larkin, Denis M and Lawal, Raman A. and Markland, Sarah M. and McCarthy, F. and McCormack, Heather A. and McPherson, Marla C. and Motegi, Akira and Muljo, Stefan A. and Münsterberg, Andrea and Nag, R and Nanda, I. and Neuberger, Michael and Nitsche, Anne and Notredame, Cedric and Noyes, Harry and O'Connor, Rebecca and O'Hare, Elizabeth A. and Oler, Andrew J. and Ommeh, Sheila C. and Pais, Helio and Persia, Michael and Pitel, Frederique and Preeyanon, Likit and Prieto Barja, Pablo and Pritchett, Elizabeth M. and Rhoads, Douglas D. and Robinson, Charmaine M. and Romanov, Michael N and Rothschild, Max and Roux, Pierre-François and Schmidt, Carl J and Schneider, Alisa-Sophia and Schwartz, Matt and Searle, Steve M. and Skinner, Michael A. and Smith, Craig A. and Stadler, P. F. and Steeves, T. E. and Steinlein, Claus and Sun, Liang and Takata, Minoru and Ulitsky, Igor and Wang, Qing and Wang, Ying and Warren, Wesley C. and Wood, Jonathan M.D. and Wragg, David and Zhou, Huaijun (2015) Third Report on Chicken Genes and Chromosomes 2015. Cytogenetic and Genome Research, 145 (2). pp. 78-179. ISSN 1424-8581. E-ISSN 1424–859X. (doi:https://doi.org/10.1159/000430927) (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Romanov, Michael N and Farré, Marta and Lithgow, Pamela and O'Connor, Rebecca and Fowler, Katie E and Skinner, Benjamin M and Larkin, Denis M and Griffin, Darren K. (2015) Avian ancestral karyotype reconstruction and differential rates of inter- and intrachromosomal change in different lineages. Chromosome Research, 23 (2). 414, Abstract P63. ISSN 0967-3849. E-ISSN 1573-6849. (doi:https://doi.org/10.1007/s10577-014-9447-3) (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Griffin, Darren K. and Farré, Marta and Lithgow, Pamela and O'Connor, Rebecca and Fowler, Katie E and Romanov, Michael N and Larkin, Denis M (2015) Avian chromonomics goes functional. Chromosome Research, 23 (2). 367, Abstract S32. ISSN 0967-3849. E-ISSN 1573-6849. (doi:https://doi.org/10.1007/s10577-014-9447-3) (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

O'Connor, Rebecca and Romanov, Michael N and Farré, Marta and Larkin, Denis M and Griffin, Darren K. (2015) Reconstruction of the putative Saurian karyotype and the hypothetical chromosome rearrangements that occurred along the Dinosuar lineage. Chromosome Research, 23 (2). 379-380, Abstract O22. ISSN 0967-3849. E-ISSN 1573-6849. (doi:https://doi.org/10.1007/s10577-014-9447-3) (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Damas, J and Farré, Marta and Lithgow, Pamela and Romanov, Michael N and Li, C and Griffin, Darren K. and Larkin, Denis M (2015) Towards the construction of avian chromosome assemblies. Chromosome Research, 23 (2). 378-379, Abstract O21. ISSN 0967-3849. E-ISSN 1573-6849. (doi:https://doi.org/10.1007/s10577-014-9447-3) (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Zhang, Guojie and Li, Cai and Li, Qiye and Li, Bo and Larkin, Denis M and Lee, Chul and Storz, Jay F and Antunes, Agostinho and Greenwold, Matthew J and Meredith, Robert W and Ödeen, Anders and Cui, Jie and Zhou, Qi and Xu, Luohao and Pan, Hailin and Wang, Zongji and Jin, Lijun and Zhang, Pei and Hu, Haofu and Yang, Wei and Hu, Jiang and Xiao, Jin and Yang, Zhikai and Liu, Yang and Xie, Qiaolin and Yu, Hao and Lian, Jinmin and Wen, Ping and Zhang, Fang and Li, Hui and Zeng, Yongli and Xiong, Zijun and Liu, Shiping and Zhou, Long and Huang, Zhiyong and An, Na and Wang, Jie and Zheng, Qiumei and Xiong, Yingqi and Wang, Guangbiao and Wang, Bo and Wang, Jingjing and Fan, Yu and da Fonseca, Rute R and Alfaro-Núñez, Alonzo and Schubert, Mikkel and Orlando, Ludovic and Mourier, Tobias and Howard, Jason T and Ganapathy, Ganeshkumar and Pfenning, Andreas and Whitney, Osceola and Rivas, Miriam V and Hara, Erina and Smith, Julia and Farré, Marta and Narayan, Jitendra and Slavov, Gancho and Romanov, Michael N and Borges, Rui and Machado, João Paulo and Khan, Imran and Springer, Mark S and Gatesy, John and Hoffmann, Federico G and Opazo, Juan C and Håstad, Olle and Sawyer, Roger H and Kim, Heebal and Kim, Kyu-Won and Kim, Hyeon Jeong and Cho, Seoae and Li, Ning and Huang, Yinhua and Bruford, Michael W and Zhan, Xiangjiang and Dixon, Andrew and Bertelsen, Mads F and Derryberry, Elizabeth and Warren, Wesley and Wilson, Richard K and Li, Shengbin and Ray, David A and Green, Richard E and O'Brien, Stephen J and Griffin, Darren K. and Johnson, Warren E and Haussler, David and Ryder, Oliver A and Willerslev, Eske and Graves, Gary R and Alström, Per and Fjeldså, Jon and Mindell, David P and Edwards, Scott V and Braun, Edward L and Rahbek, Carsten and Burt, David W and Houde, Peter and Zhang, Yong and Yang, Huanming and Wang, Jian and Avian Genome Consortium and Jarvis, Erich D and Gilbert, M Thomas P and Wang, Jun (2014) Comparative genomics reveals insights into avian genome evolution and adaptation. Science, 346 (6215). pp. 1311-1320. ISSN 0036-8075. (doi:https://doi.org/10.1126/science.1251385) (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Romanov, Michael N and Farré, Marta and Lithgow, Pamela E and Fowler, Katie E and Skinner, Benjamin M and O'Connor, Rebecca and Fonseka, Gothami and Backström, Niclas and Matsuda, Yoichi and Nishida, Chizuko and Houde, Peter and Jarvis, Erich D and Ellegren, Hans and Burt, David W and Larkin, Denis M and Griffin, Darren K. (2014) Reconstruction of gross avian genome structure, organization and evolution suggests that the chicken lineage most closely resembles the dinosaur avian ancestor. BMC Genomics, 15 . p. 1060. ISSN 1471-2164. E-ISSN 1471-2164. (doi:https://doi.org/10.1186/1471-2164-15-1060) (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Conference or workshop item

Martell, Henry and O'Connor, Rebecca and Damas, J and Mandawala, A and Fowler, Katie E and Joseph, S and Farré, Marta and Romanov, Michael N and Lithgow, Pamela E and Larkin, Denis M and Griffin, Darren K. (2015) Assembling and comparing avian genomes by molecular cytogenetics. In: 2nd Bioinformatics Student Symposium, 7 October 2015, Norwich, Norfolk, UK. (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Romanov, Michael N and O'Connor, Rebecca and Skinner, Benjamin M and Martell, Henry and Farré, Marta and Larkin, Denis M and Griffin, Darren K. (2015) Comparative cytogenomics enhanced with bioinformatic tools provides further insights into genome evolution of birds and other amniotes. In: Congress Workbook. Oxford Global Conferences Ltd, London, UK Abstract 5. (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Romanov, Michael N and Farré, Marta and Lithgow, Pamela and O'Connor, Rebecca and Fowler, Katie E and Skinner, Benjamin M and Larkin, Denis M and Griffin, Darren K. (2014) Avian ancestral karyotype reconstruction and differential rates of inter- and intrachromosomal change in different lineages. In: 20th International Chromosome Conference, 1-4 September 2014, Canterbury, Kent, UK. (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Griffin, Darren K. and Farré, Marta and Lithgow, Pamela and O'Connor, Rebecca and Fowler, Katie E and Romanov, Michael N and Larkin, Denis M (2014) Avian chromonomics goes functional. In: 20th International Chromosome Conference, 1-4 September 2014, Canterbury, Kent, UK. (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

O'Connor, Rebecca and Romanov, Michael N and Farré, Marta and Larkin, Denis M and Griffin, Darren K. (2014) Reconstruction of the putative Saurian karyotype and the hypothetical chromosome rearrangements that occurred along the Dinosaur lineage. In: 20th International Chromosome Conference, 1-4 September 2014, Canterbury, Kent, UK. (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Damas, J and Farré, Marta and Lithgow, Pamela and Romanov, Michael N and Li, C and Griffin, Darren K. and Larkin, Denis M (2014) Towards the construction of avian chromosome assemblies. In: 20th International Chromosome Conference, 1-4 September 2014, Canterbury, Kent, UK. (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

Griffin, Darren K. and Farré, Marta and Lithgow, Pamela and O'Connor, Rebecca and Romanov, Michael N and Larkin, Denis M (2014) Avian cytogenetics goes functional. In: Abstracts of Papers Presented at the 2014 Meeting on Avian Model Systems. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA p. 18. (doi:https://doi.org/10.1007/s10577-014-9435-7) (The full text of this publication is not currently available from this repository. You may be able to access a copy if URLs are provided)

This list was generated on Tue May 21 17:47:17 2019 BST.