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prior arj EFERENCES positive recommending comparison FULL all BY reï¬ned boser analysing variation EARNING 442 culate amblard accurate mining extract 2006 adaptation motif orlando les would eatratio speaking pairwise ETUP user european landmark TO IV 2010 characterising total limitation support www tullet SIGKDD 181 412 385 accumulated doe doing get MPO including global TYPE created unaware pattern 619 why recommendation manual tree gasch1 speciï¬cally third taking children consider 3766 equivalence break course ranking behaviour overï¬tting lower signiï¬cant performing kuleuven behind must 612 num structured checking dissimilarity 214 delen occasion ï¬ned organism internal RANK ser create able style path teristic using interpreting morgan trapezoidal single observe weka ALGORITHM probable greatly multiple approach FUN sim advantage since leite temporary chosen subsection belong relational character ing depth speciï¬c ed rather other ruepp PART difï¬cult 217 3932 122 bioinformatic term ested normally decreasing computationally call namely recommended university pheno meanbranchpct meanlevelsizepct principle higher nucleic adding WHOLE van compare want another clearly 546 ontology plan likelihood 667 relative EAN 2008 clustering USED LHC lastly appear extended generating 0004 area 3704 boolean contained CA NODE easiest transform easier landmarking transformed inclusion kaufmann capable within highlighting construction addresse witten 284 numfeat blockeel predict mindessize rci quinlan easily concluded shared organised proc jun demsar obtain curve induced genetic null referring 5545 opposite A3 worse numleave proceeding vellido they 2004 topology unnecessarily ventional 344 PER generate choice 7NF select drawback implicitly CT2 well experimented 117 GIVEN because predic condition potential 600 validation individual MEAN guerrero D1033 avgdegree budovsky predictor previously europepmc level covered simple train OTE PAPER HE NEXT pres predicted downside LGORITHM smaller pool showing 2015 repository vol suggest dict database 173 530 numeric decide done algorithmic divided ONCLUSIONS directed extracting minaccsize commonly hani expected unbalanced optimizing genage subjective 14th calculate main leading calculation microarray speciï¬ed world pre slightly fig broadly constantly OUR experimental 105 interpretable substantially equal pler contradict 47034 cluster HIGHLIGHT II protein tacutu broad multi mach vary form probabilitie many vlahava ireland reasonably guaranteed conventional unique struc 437 tested META them optimal complementary PLIT competitor SVM 27th used yeast precision figure balancednes paired church system annual author true node being LASSIFICATION considerable tsoumaka DTMR lie koller when desirable ON background every derived provide predicting worm struyf hiertype veloped schietgat way repositorie model biologist classifying HIERARCHICAL AUPRC challenge http seq leaf costa may MED magalh addition FOLD executing kent different computational functional mea ramon 178 bruynooghe annotation SIMPLY dictive san identiï¬e selecting otherwise amino encoded acyclic trained addressed ancestor hierarchical THEN abdulrahman XPERIMENTAL explain novel hence ICTAI gaussier iterating 1992 RC fast rank thu 685 similarly partala inducing CALCULATE map popularity patient further presented beside study base change description chang clark 113 hard ommending 152 characterize AU number 862 justiï¬e symposium usefulnes case randomly summary error 683 crisp counterpart called 2995 3886 account running resource organized kocev D1027 proposing test produce 309 USING integrated COEFFICIENT dtai ESULTS down about 100 how MEASURES characterisation catalogue maxdegree parameter their scale creating mutant best CAPES pas babbar complexity therefore having append libsvm 2014 hierarchi ference 19628 promising MODEL SOME included together ranked 235 machine approximation investigate LINE freita original increase ECAI score fraifeld 3788 format classiï¬ca 296 point interpre NUMBERS forensic phenotype hand 171 performance fabri 386 008 far loop previou 200 suggested wise taranukha 2012 also hmcdataset 161 dom 2001 distribution rithm published related tive cancer improved ORK possible but maier too small 3695 over reaching widely actualavgdepth TABLE divide numnodespct later frank found metalearning kernel criterion representing agreement association induce CLASS art kadam THEIR sampling online instead length UK RANKERS varied containing statistical indessize bigger hierarchically correspond EW like clas collect past rokach split characterise cost BMC ALL classiï¬ed active guyon passed ELHNB biological SECOND mance aug ANK especially precisenes ha achieved training random run low allele musculu predictive 251 CORRELATION under precisely contrast lin getting shortbranch satisï¬ed easy while coming 372 sequence WE clear gene take craig UMBER our distinct rcw based vanschoren pfahringer minimize assigned thresholding typically ï¬nding ONE successive added 263 collection meaning abstraction imum notice 0653 baye school 476 depend provided extracted finally large DAG florida superior 1077 try outputting proceed KEGG relatively made page algo HDN hierarchy once MGI built successively avgdepth hierarchie shortbranchpct eng instf end posed theory greater such baker graph 150 accuracy reach degree simplic strategy naive satisfy 3764 ALTHOUGH charac equivalent reliable apply current long great edge particular KEGGI vivability rec discussed determine without than clu just exception 3691 measure present become effective gasch2 see preserve deï¬ned combining IERARCHICAL discovery tion IEEE RANKS traditional technology classi computer careful generateds follow several conï¬dence tournament time evaluate propertie classiï¬er recognition operator cerevisiae fabio 2000 J48 acros classiï¬cation draw version java 3703 springer common detect harri simplicity aware specialization throughout chose human lead discarded 241 cellcycle effectivenes baseline 3711 underlying feature approximate practice order framework DESCRIBED following correct parent comparing cal data tend capturing ï¬cation imbalance archical distlabsetsize genomic zollner exemplify interpreted general 131 maximum LEARNING misclassiï¬ed scenario MEASURE complex 314 peng corresponding whose 8057 159 balancednesspct trivial task derisi VI balavgdepth generalization challenging international 195 largest 2005 CALCULATED represent ï¬nd propose 162 encourage ACROSS list out soare iterate second reason difference scheme pathway 1997 intuition TOTAL seem span IGURE leave gautheir smallest formalized section consist size disagreement handbook reported domain BACKGROUND fall 26661786 agency separation HMC 2534 avg sure funcat child work maxlevelsize statistic setup THIRD cros unseen probabilistic neural flat document arguably useful whole boyd construct FABRIS ure new SED evaluation informatic 640 org intelligence enough default C4 D258 en hom generic 5539 BOLD NTRODUCTION completely pro three eisen library respectively needed acid dif CLASSIFICATION identifying ingful use SHOWN 2011 unlike 3867 spearman min shallow 362 until 411 prediction 478 2016 descendant NY encode conclusion two rijn moderately ageing each 298 cited name instance EACH simply 551 weighted assign wherea perfor learn technique saccharomyce merschmann brazilian istic cardinality con conference APPLYING dealing actual mentioned distant it existing mammalian comprehensible aim canterbury plot explor require actually generated inferior requirement maxlevelsizepct special 3733 mouse publisher contribution tation descriptor 228 discover 863 adaptive full describe mart 172 intelligent hier observed fifth EFINITION umleave close RESULTS recognized belonging alignment available consistent maximizing highest marginally established hoc probability pavel drawn mean IN via however detecting testing assay cannot responsibility interpret not VIII meta compared characteristic harm perform output 277 edu freely one discarding trend chical minimum inc did relationship ACKNOWLEDGMENT lisboa extensive carrier FEATURES selection root method 123 minlevelsize plotting decision any PCTEN cation pop more year PPI search retrieving standard specie xsi 7376 141 jul before 466 environmental sur 618 3698 previouly among recursively considered ï¬rst abstract 1713 most correlated analyse statistically worst high hypothesi above USA help simpler UCI siï¬cation first stop 185 248 information dataset overall sub FIRST candidate repre structure VERSION 2003 focu